Loading required namespace: GenomicFiles Using local VCF. File already tabix-indexed. Finding empty VCF columns based on first 10,000 rows. Dropping 1 duplicate column(s). 1 sample detected: EBI-a-GCST004603 Constructing ScanVcfParam object. VCF contains: 29,148,896 variant(s) x 1 sample(s) Reading VCF file: multi-threaded (4 threads) Loading required namespace: GenomicFiles Using local VCF. File already tabix-indexed. Finding empty VCF columns based on first 10,000 rows. Dropping 1 duplicate column(s). 1 sample detected: EBI-a-GCST004603 Constructing ScanVcfParam object. VCF contains: 29,148,896 variant(s) x 1 sample(s) Reading VCF file: multi-threaded (4 threads)